sync.sh Script - dotfiles

The sync.sh script is the primary tool for synchronizing dotfiles from the repository to your system. It uses the custom stot wrapper to create symbolic links and copy files to their appropriate locations.

Overview

Location: ~/dotfiles/sync.sh Purpose: Synchronizes all dotfiles by creating symbolic links from ~/dotfiles/ to their target locations in the home directory and system directories. Dependencies:

stot command (automatically bootstrapped)
echo_separate command (for formatted output)

Usage

Standard Sync

sh ~/dotfiles/sync.sh

Synchronizes all standard configuration files and directories.

X11 Configuration Sync

sh ~/dotfiles/sync.sh x

Includes X11-specific system configuration files in addition to standard sync.

The sync script will:

Create symbolic links (overwrites existing links)
Require sudo for system file operations
Modify files in /etc/, /boot/, /usr/, and /srv/

Backup important files before running!

Script Source

#!/bin/bash

# Bootstrap stot command
[ ! -f ~/.local/bin/stot ] && ln -sv ~/dotfiles/bin/stot ~/.local/bin/stot

# X11 System Configuration (Optional)
if [ "$1" == "x" ]; then
    echo_separate "X11"
    stot -l  home/.xinitrc                           /
    stot -l  home/.xprofile                          /

    stot -c  etc/X11/xorg.conf.d/00-keyboard.conf
    stot -c  etc/X11/xorg.conf.d/50-mouse-acceleration.conf
    stot -c  etc/X11/xorg.conf
fi

# Home Directory Files
echo_separate "/home"
stot -l home/.nvidia-settings-rc                /
stot -l home/.screenlayout-main.sh              /
stot -l home/.Xresources                        /
stot -l home/.zshenv                            /
stot -l home/.zshrc                             /

# Application Configuration
echo_separate "/home/.config"
stot -l .config/alacritty
stot -l .config/BetterDiscord
stot -l .config/cava
stot -l .config/doom
stot -l .config/dunst
stot -l .config/flameshot
stot -l .config/i3
stot -l .config/i3blocks
stot -l .config/kitty
stot -l .config/lf
stot -l .config/mpv
stot -l .config/nvim
stot -l .config/neofetch
stot -l .config/polybar
stot -l .config/ranger
stot -l .config/redshift
stot -l .config/rofi
stot -l .config/xdg-desktop-portal
stot -l .config/xmobar
stot -l .config/xmonad
stot -l .config/zathura

# Special Configuration Files
stot -l .config/firefox/user.js                  .mozilla/firefox/vdhmokqy.default-nightly/user.js
stot -l .config/dolphin/dolphinrc                .config/dolphinrc
stot -l .config/git/.gitconfig                   .gitconfig
stot -l .config/pavucontrol/pavucontrol.ini      .config/pavucontrol.ini
stot -l .config/picom/picom.conf                 .config/picom.conf
stot -l .config/most/.mostrc                     .mostrc
stot -l .config/tmux/.tmux.conf                  .tmux.conf
stot -l .config/yakuake/yakuakerc                .config/yakuakerc

stot -l .config/user-dirs.dirs
stot -l .config/plasma-localerc

# Custom Scripts
echo_separate "/home/.local"
stot -l bin .local/bin

# Bootloader
echo_separate "/boot"
stot -c boot/efi/EFI/refind/refind.conf

# System Configuration
echo_separate "/etc"
stot -c etc/dhcpcd.conf
stot -c etc/hosts
stot -c etc/locale.conf
stot -c etc/locale.gen
stot -c etc/pacman.conf
stot -c etc/resolv.conf
stot -c etc/sysctl.conf
stot -c etc/vconsole.conf

stot -c etc/httpd/conf/httpd.conf
stot -c etc/httpd/conf/extra/phpmyadmin.conf
stot -c etc/lightdm/lightdm.conf
stot -c etc/lightdm/lightdm-webkit2-greeter.conf

stot -c etc/modprobe.d/blacklist.conf
stot -c etc/pacman.d/mirrorlist
stot -c etc/php/php.ini
stot -c etc/pulse/default.pa
stot -c etc/systemd/logind.conf
stot -c etc/xdg/reflector/reflector.conf

# System Resources
echo_separate "/usr"
stot -c usr/lib/NetworkManager/conf.d/20-connectivity.conf

# Service Data
echo_separate "/srv"
stot -c srv/http/test.php

echo -e "\n"

Script Breakdown

Bootstrap Section

[ ! -f ~/.local/bin/stot ] && ln -sv ~/dotfiles/bin/stot ~/.local/bin/stot

Purpose: Ensures the stot command is available before running the sync.

Checks if ~/.local/bin/stot exists
If not, creates a symbolic link from ~/dotfiles/bin/stot
This makes stot command available for the rest of the script

X11 Configuration (Optional)

if [ "$1" == "x" ]; then
    stot -l  home/.xinitrc                           /
    stot -l  home/.xprofile                          /
    stot -c  etc/X11/xorg.conf.d/00-keyboard.conf
    stot -c  etc/X11/xorg.conf.d/50-mouse-acceleration.conf
    stot -c  etc/X11/xorg.conf
fi

Activated by: sh sync.sh xPurpose: Syncs X Window System configuration files.Files:

X session initialization (.xinitrc, .xprofile)
Xorg server configuration (keyboard, mouse, main config)

Home Directory Files

stot -l home/.nvidia-settings-rc                /
stot -l home/.screenlayout-main.sh              /
stot -l home/.Xresources                        /
stot -l home/.zshenv                            /
stot -l home/.zshrc                             /

Operation: Creates symbolic links (-l flag)Target: ~/ (home directory root)Files:

NVIDIA settings
Display layout script
X resources
Zsh configuration

Application Configurations

stot -l .config/alacritty
stot -l .config/i3
stot -l .config/nvim
# ... (21 total directories)

Operation: Creates symbolic links for entire directoriesTarget: ~/.config/Pattern:

~/dotfiles/.config/app/* → ~/.config/app/*

Special Configuration Files

stot -l .config/firefox/user.js    .mozilla/firefox/vdhmokqy.default-nightly/user.js
stot -l .config/git/.gitconfig     .gitconfig
stot -l .config/picom/picom.conf   .config/picom.conf

Purpose: Links files to non-standard locationsPattern:

stot -l SOURCE CUSTOM_TARGET

These files don’t follow the standard XDG directory pattern and require explicit target paths.

Custom Scripts

stot -l bin .local/bin

Operation: Links all scripts in bin/ directoryResult:

~/dotfiles/bin/* → ~/.local/bin/*

Makes all custom commands available in $PATH.

System Files (Root Required)

stot -c boot/efi/EFI/refind/refind.conf
stot -c etc/hosts
stot -c etc/pacman.conf
# ... (18 total files)

Operation: Copies files (-c flag) with sudo privilegesTarget: Root directories (/boot/, /etc/, /usr/, /srv/)Warning: These operations require root access and modify system files.

Sync Order

The script syncs files in this order:

Bootstrap - Ensure stot is available
X11 - (Optional) X Window System config
Home - User home directory files
Config - Application configurations in .config/
Special - Non-standard config file locations
Scripts - Custom commands in bin/
Boot - Bootloader configuration
System - System-wide configuration files
Resources - System resources
Services - Service data files

Operation Modes

Link Mode (`-l`)

Command: stot -l SOURCE [TARGET] Behavior:

Creates symbolic links from dotfiles to target location
Default target: ~/<SOURCE>
Preserves file structure
Changes in dotfiles automatically reflected in system

Example:

stot -l .config/i3
# Result: ~/.config/i3/* → ~/dotfiles/.config/i3/*

Copy Mode (`-c`)

Command: stot -c SOURCE [TARGET] Behavior:

Copies files to system directories
Requires sudo for /etc/, /boot/, etc.
Default target: /<SOURCE>
Creates independent copy (not linked)

Example:

stot -c etc/hosts
# Result: /etc/hosts ← ~/dotfiles/etc/hosts (copy)

Output Format

The script uses echo_separate to create formatted section headers:

==== /home ==========================================
|:ok | ln  | 📁 | home/.zshrc
|:ok | ln  | 📁 | home/.Xresources

==== /home/.config ==================================
|:ok | ln  | 📁 | .config/i3
|:ok | ln  | 📁 | .config/nvim

Status Indicators:

|:ok | - Successful operation
|:error | - Failed operation

Operation Types:

ln | 📄 | - Symbolic link (file)
ln | 📁 | - Symbolic link (directory)
cp | 📄 | - Copy (file)

Error Handling

The stot command handles common errors:

Missing Source File

~/dotfiles/etc/example is not valid

Cause: Source file doesn’t exist in dotfiles repoSolution: Verify file path or remove from sync.sh

Permission Denied

|:error | /etc/hosts

Cause: Insufficient permissions for system filesSolution: Run with sudo or fix permissions

Directory Not Found

|:error | ~/.config/example not found

Cause: Parent directory doesn’t existSolution: stot automatically creates parent directories

Best Practices

Before First Run

Backup existing configs
Review sync.sh contents
Check file paths match your system
Test with dry run if possible

After Changes

Edit files in ~/dotfiles/
Changes auto-reflect (symlinks)
Commit to git repository
Re-run sync.sh on new machines

System Files

Use copy mode (-c) for /etc/
Require sudo privileges
Test changes carefully
Keep backups of originals

Customization

Edit sync.sh to add/remove files
Follow existing patterns
Use stot -h for help
Test on non-critical system first

Common Use Cases

New System Setup

# Clone dotfiles
git clone git@github.com:joaopedroaats/dotfiles.git ~/dotfiles

# Run full sync (without X11)
sh ~/dotfiles/sync.sh

# Or with X11 configuration
sh ~/dotfiles/sync.sh x

Update Existing Configuration

# Edit files in dotfiles repo
vim ~/dotfiles/.config/i3/config

# No need to re-run sync (symlinks)
# Just restart the application
$mod+Shift+r  # Restart i3

Sync System Files After Changes

# After modifying system config
vim ~/dotfiles/etc/pacman.conf

# Re-sync to apply
sh ~/dotfiles/sync.sh

Advanced Usage

Custom Sync Script

You can create a custom sync script for specific configurations:

#!/bin/bash
# custom-sync.sh

# Only sync development tools
stot -l .config/nvim
stot -l .config/git/.gitconfig .gitconfig
stot -l bin .local/bin

Selective Sync

# Extract specific commands from sync.sh
stot -l .config/i3
stot -l .config/polybar
stot -l .config/kitty

Dependencies

The sync script requires:

Bash or Zsh shell
stot command (auto-bootstrapped)
echo_separate command
GNU coreutils (ln, mkdir, rm)
sudo for system file operations

Troubleshooting

Command Not Found: stot

Problem: stot command not in PATHSolution:

# Manually create symlink
mkdir -p ~/.local/bin
ln -s ~/dotfiles/bin/stot ~/.local/bin/stot

# Add to PATH if needed
export PATH="$HOME/.local/bin:$PATH"

Permission Denied on System Files

Problem: Cannot copy to /etc/, /boot/, etc.Solution:

# Run specific commands with sudo
sudo sh ~/dotfiles/sync.sh

# Or manually copy individual files
sudo cp ~/dotfiles/etc/hosts /etc/hosts

Broken Symlinks

Problem: Links pointing to wrong locationSolution:

# Remove broken link
rm ~/.config/i3

# Re-run sync
sh ~/dotfiles/sync.sh

Firefox Profile Path

Problem: Firefox profile path doesn’t matchSolution:

# Find your profile directory
ls ~/.mozilla/firefox/

# Update sync.sh with correct path
stot -l .config/firefox/user.js .mozilla/firefox/YOUR_PROFILE/user.js

Documentation Index

​Overview

​Usage

​Standard Sync

​X11 Configuration Sync

​Script Source

​Script Breakdown

​Sync Order

​Operation Modes

​Link Mode (-l)

​Copy Mode (-c)

​Output Format

​Error Handling

​Best Practices

Before First Run

After Changes

System Files

Customization

​Common Use Cases

​New System Setup

​Update Existing Configuration

​Sync System Files After Changes

​Advanced Usage

​Custom Sync Script

​Selective Sync

​Dependencies

​Troubleshooting

​See Also

Overview

Usage

Standard Sync

X11 Configuration Sync

Script Source

Script Breakdown

Sync Order

Operation Modes

Link Mode (`-l`)

Copy Mode (`-c`)

Output Format

Error Handling

Best Practices

Common Use Cases

New System Setup

Update Existing Configuration

Sync System Files After Changes

Advanced Usage

Custom Sync Script

Selective Sync

Dependencies

Troubleshooting

See Also